python-HTSeq-0.5.4p5-1.sdl6.i686.rpm


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Description

python-HTSeq - A framework to process and analyze data from high-throughput sequencing (HTS) assays

Property Value
Distribution CentOS 6
Repository PUIAS Computational i386
Package name python-HTSeq
Package version 0.5.4p5
Package release 1.sdl6
Package architecture i686
Package type rpm
Installed size 683.73 KB
Download size 183.07 KB
Official Mirror springdale.math.ias.edu
HTSeq is a Python package that provides infrastructure to process data from high-throughput sequencing assays.

Alternatives

Package Version Architecture Repository
python-HTSeq-0.5.4p5-1.sdl6.x86_64.rpm 0.5.4p5 x86_64 PUIAS Computational
python-HTSeq - - -

Requires

Name Value
/usr/bin/python -
libc.so.6(GLIBC_2.4) -
libgcc_s.so.1 -
libgcc_s.so.1(GCC_3.0) -
libm.so.6 -
libpthread.so.0 -
libpthread.so.0(GLIBC_2.0) -
libpython2.6.so.1.0 -
libstdc++.so.6 -
libstdc++.so.6(CXXABI_1.3) -
libstdc++.so.6(GLIBCXX_3.4) -
numpy -
python(abi) = 2.6
python-matplotlib -
rtld(GNU_HASH) -

Provides

Name Value
_HTSeq.so -
_StepVector.so -
python-HTSeq = 0.5.4p5-1.sdl6
python-HTSeq(x86-32) = 0.5.4p5-1.sdl6

Download

Type URL
Binary Package python-HTSeq-0.5.4p5-1.sdl6.i686.rpm
Source Package python-HTSeq-0.5.4p5-1.sdl6.src.rpm

Install Howto

  1. Download the latest puias-computational rpm from
    http://springdale.math.ias.edu/data/puias/computational/6/i386/
  2. Install puias-computational rpm:
    # rpm -Uvh puias-computational*rpm
  3. Install python-HTSeq rpm package:
    # yum install python-HTSeq

Files

Path
/usr/bin/htseq-count
/usr/bin/htseq-qa
/usr/lib/python2.6/site-packages/HTSeq/StepVector.py
/usr/lib/python2.6/site-packages/HTSeq/StepVector.pyc
/usr/lib/python2.6/site-packages/HTSeq/StepVector.pyo
/usr/lib/python2.6/site-packages/HTSeq/_HTSeq.so
/usr/lib/python2.6/site-packages/HTSeq/_HTSeq_internal.py
/usr/lib/python2.6/site-packages/HTSeq/_HTSeq_internal.pyc
/usr/lib/python2.6/site-packages/HTSeq/_HTSeq_internal.pyo
/usr/lib/python2.6/site-packages/HTSeq/_StepVector.so
/usr/lib/python2.6/site-packages/HTSeq/__init__.py
/usr/lib/python2.6/site-packages/HTSeq/__init__.pyc
/usr/lib/python2.6/site-packages/HTSeq/__init__.pyo
/usr/lib/python2.6/site-packages/HTSeq/_version.py
/usr/lib/python2.6/site-packages/HTSeq/_version.pyc
/usr/lib/python2.6/site-packages/HTSeq/_version.pyo
/usr/lib/python2.6/site-packages/HTSeq-0.5.4p5-py2.6.egg-info/PKG-INFO
/usr/lib/python2.6/site-packages/HTSeq-0.5.4p5-py2.6.egg-info/SOURCES.txt
/usr/lib/python2.6/site-packages/HTSeq-0.5.4p5-py2.6.egg-info/dependency_links.txt
/usr/lib/python2.6/site-packages/HTSeq-0.5.4p5-py2.6.egg-info/top_level.txt
/usr/lib/python2.6/site-packages/HTSeq/scripts/__init__.py
/usr/lib/python2.6/site-packages/HTSeq/scripts/__init__.pyc
/usr/lib/python2.6/site-packages/HTSeq/scripts/__init__.pyo
/usr/lib/python2.6/site-packages/HTSeq/scripts/count.py
/usr/lib/python2.6/site-packages/HTSeq/scripts/count.pyc
/usr/lib/python2.6/site-packages/HTSeq/scripts/count.pyo
/usr/lib/python2.6/site-packages/HTSeq/scripts/qa.py
/usr/lib/python2.6/site-packages/HTSeq/scripts/qa.pyc
/usr/lib/python2.6/site-packages/HTSeq/scripts/qa.pyo
/usr/share/doc/python-HTSeq-0.5.4p5/README
/usr/share/doc/python-HTSeq-0.5.4p5/VERSION

Changelog

2013-01-08 - Josko Plazonic <plazonic@princeton.edu> - 0.5.4p5-1
- initial build

See Also

Package Description
python-Traits-4.3.0-1.sdl6.i686.rpm Explicitly typed attributes for Python
python-amqp-1.4.9-1.sdl6.noarch.rpm Low-level AMQP client for Python (fork of amqplib)
python-amqp-doc-1.4.9-1.sdl6.noarch.rpm Documentation for python-amqp
python-anyjson-0.3.3-4.sdl6.noarch.rpm Wraps the best available JSON implementation available
python-ase-3.10.0-15.sdl6.noarch.rpm Atomic Simulation Environment
python-basemap-0.99.4-10.puias6.i686.rpm Plots data on map projections (with continental and political boundaries)
python-basemap-data-0.99.4-2.puias6.noarch.rpm Data for python-basemap
python-basemap-data-hires-0.99.4-2.puias6.noarch.rpm High resolution map data for python-basemap
python-basemap-examples-0.99.4-10.puias6.i686.rpm Example programs and data for python-basemap
python-beautifulsoup4-4.3.1-1.sdl6.noarch.rpm HTML/XML parser for quick-turnaround applications like screen-scraping
python-billiard-3.3.0.17-2.sdl6.i686.rpm Multiprocessing Pool Extensions
python-biopython-1.66-3.sdl6.i686.rpm Python tools for computational molecular biology
python-biopython-doc-1.66-3.sdl6.noarch.rpm PDF and HTML documentation of biopython
python-bson-3.2-1.sdl6.i686.rpm Python bson library
python-celery-3.1.11-1.sdl6.noarch.rpm Distributed Task Queue
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