python26-HTSeq-0.5.4p5-1.el5.x86_64.rpm


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Description

python26-HTSeq - A framework to process and analyze data from high-throughput sequencing (HTS) assays

Property Value
Distribution CentOS 5
Repository PUIAS Computational x86_64
Package name python26-HTSeq
Package version 0.5.4p5
Package release 1.el5
Package architecture x86_64
Package type rpm
Installed size 719.28 KB
Download size 232.84 KB
Official Mirror springdale.math.ias.edu
HTSeq is a Python package that provides infrastructure to process data from high-throughput sequencing assays.

Alternatives

Package Version Architecture Repository
python26-HTSeq-0.5.4p5-1.el5.i386.rpm 0.5.4p5 i386 PUIAS Computational
python26-HTSeq - - -

Requires

Name Value
/usr/bin/python2.6 -
libc.so.6()(64bit) -
libc.so.6(GLIBC_2.2.5)(64bit) -
libc.so.6(GLIBC_2.3)(64bit) -
libc.so.6(GLIBC_2.4)(64bit) -
libgcc_s.so.1()(64bit) -
libgcc_s.so.1(GCC_3.0)(64bit) -
libm.so.6()(64bit) -
libpthread.so.0()(64bit) -
libpython2.6.so.1.0()(64bit) -
libstdc++.so.6()(64bit) -
libstdc++.so.6(CXXABI_1.3)(64bit) -
libstdc++.so.6(GLIBCXX_3.4)(64bit) -
numpy26 -
python26-matplotlib -
rtld(GNU_HASH) -

Provides

Name Value
_HTSeq.so()(64bit) -
_StepVector.so()(64bit) -
python26-HTSeq = 0.5.4p5-1.el5

Download

Type URL
Binary Package python26-HTSeq-0.5.4p5-1.el5.x86_64.rpm
Source Package python26-HTSeq-0.5.4p5-1.el5.src.rpm

Install Howto

  1. Create the repository config file /etc/yum.repos.d/puias-computational.repo:
    [puias-computational]
    name=PUIAS Computational
    baseurl=http://springdale.math.ias.edu/data/puias/computational/5/x86_64/
    enabled=1
    gpgcheck=0
    
  2. Install python26-HTSeq rpm package:
    # yum install python26-HTSeq

Files

Path
/usr/bin/htseq-count
/usr/bin/htseq-qa
/usr/lib64/python2.6/site-packages/HTSeq/StepVector.py
/usr/lib64/python2.6/site-packages/HTSeq/StepVector.pyc
/usr/lib64/python2.6/site-packages/HTSeq/StepVector.pyo
/usr/lib64/python2.6/site-packages/HTSeq/_HTSeq.so
/usr/lib64/python2.6/site-packages/HTSeq/_HTSeq_internal.py
/usr/lib64/python2.6/site-packages/HTSeq/_HTSeq_internal.pyc
/usr/lib64/python2.6/site-packages/HTSeq/_HTSeq_internal.pyo
/usr/lib64/python2.6/site-packages/HTSeq/_StepVector.so
/usr/lib64/python2.6/site-packages/HTSeq/__init__.py
/usr/lib64/python2.6/site-packages/HTSeq/__init__.pyc
/usr/lib64/python2.6/site-packages/HTSeq/_version.py
/usr/lib64/python2.6/site-packages/HTSeq/_version.pyc
/usr/lib64/python2.6/site-packages/HTSeq/_version.pyo
/usr/lib64/python2.6/site-packages/HTSeq-0.5.4p5-py2.6.egg-info/PKG-INFO
/usr/lib64/python2.6/site-packages/HTSeq-0.5.4p5-py2.6.egg-info/SOURCES.txt
/usr/lib64/python2.6/site-packages/HTSeq-0.5.4p5-py2.6.egg-info/dependency_links.txt
/usr/lib64/python2.6/site-packages/HTSeq-0.5.4p5-py2.6.egg-info/top_level.txt
/usr/lib64/python2.6/site-packages/HTSeq/scripts/__init__.py
/usr/lib64/python2.6/site-packages/HTSeq/scripts/__init__.pyc
/usr/lib64/python2.6/site-packages/HTSeq/scripts/__init__.pyo
/usr/lib64/python2.6/site-packages/HTSeq/scripts/count.py
/usr/lib64/python2.6/site-packages/HTSeq/scripts/count.pyc
/usr/lib64/python2.6/site-packages/HTSeq/scripts/qa.py
/usr/lib64/python2.6/site-packages/HTSeq/scripts/qa.pyc
/usr/lib64/python2.6/site-packages/HTSeq/scripts/qa.pyo
/usr/share/doc/python26-HTSeq-0.5.4p5/README
/usr/share/doc/python26-HTSeq-0.5.4p5/VERSION

Changelog

2013-01-08 - Josko Plazonic <plazonic@princeton.edu> - 0.5.4p5-1
- initial build

See Also

Package Description
python26-argparse-1.2.1-3.el5.noarch.rpm Optparse inspired command line parser for Python
python26-babel-0.9.5-2.el5.noarch.rpm Library for internationalizing Python applications
python26-biopython-1.58-1.el5.x86_64.rpm Python tools for computational molecular biology
python26-boto-2.25.0-2.el5.noarch.rpm A simple lightweight interface to Amazon Web Services
python26-conf_d-0.0.4-1.el5.noarch.rpm read configuration files, conf.d style
python26-daemon-1.5.2-1.sdl5.noarch.rpm Library to implement a well-behaved Unix daemon process
python26-dateutil-1.4.1-7.sdl5.noarch.rpm Powerful extensions to the standard datetime module
python26-devel-2.6.8-2.el5.x86_64.rpm The libraries and header files needed for Python development
python26-distribute-0.6.34-4.sdl5.noarch.rpm Easily build and distribute Python packages
python26-docutils-0.6-1.el5.noarch.rpm A system for processing plaintext documentation
python26-gdata-2.0.11-2.sdl5.noarch.rpm A Python module for accessing online Google services
python26-glob2-0.3-1.el5.noarch.rpm Version of the glob module that can capture patterns and supports recursive wildcards
python26-imaging-1.1.7-4.el5.x86_64.rpm Python's own image processing library
python26-imaging-devel-1.1.7-4.el5.x86_64.rpm Development files for python-imaging
python26-imaging-sane-1.1.7-4.el5.x86_64.rpm Python Module for using scanners
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